Introduction

PSISearch2D application runs query-seeded iterative sequence search against UniProt and other major protein sequence data as well as retrieving Pfam and UniProt domain annotation. It demonstrates combined domain and sequence alignments in novel visualizations according to a newly defined cValue. PSISearch2D achieves much better selectivity compared with other iterative protein sequence search severs at a similar speed. Together with other new features of auto-iteration mode and optional programs of ggsearch / glsearch/ psiblast for global and local alignments, PSISearch2D enhances remotely related protein search.

Get Started