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PSISearch2D
Input form
Web services
Help & Documentation
Tools
/
Sequence Similarity Searching
/ PSISearch2D
Step 1
Selected your database
Model IDs
UniProt Knowledgebase
UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot isoforms
UniProtKB/TrEMBL
Taxonomy
Bacteria
Virus
Archaea
Eukaryota
Model Species
Human
Mouse
Rattus
Zebrafish
Ecoli
Step 2
Enter your input sequence
Enter or paste
a PROTEIN
sequence
in any supported format:
Step 3
Set your parameters
ITEREATION RELATED PARAMETERS
ITERATION PROGRAM
SSEARCH
PSIBLAST
GGSEARCH
GLSEARCH
PSSM E-VALUE CUT-OFF
1.0e-6
1.0e-5
1.0e-4
2.0e-4
5.0e-4
1.0e-3
2.0e-3
5.0e-3
1.0e-2
2.0e-2
0.1
0.3
0.5
1.0
3.0
10.0
MAX ITERATION NUMBER
1
2
3 (default)
4
5
6
7
8
9
10
11
12
13
14
15
ANNOT_DB
pfam
uniprot
cdd
prosite
none
Step 4
Submit your job
Be notified by email
(Tick tthis box if you want to be notified by email when the resulets are available)
EMAIL:
TITLE:
If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis