PSISearch2 < Sequence Similarity Searching

PSISearch2D web server

The PSISearch2D web server runs query-seeded sequence iterative search against UniProt and other major protein sequence data, achieves much better selectivity compared with other iterative protein search severs at a similar speed, and demonstrates resulted domain and sequence alignments together in novel and user-friendly visualizations.

N.B. PSISearch2 does not accept sequences containing bases containing translation STOP residues represented with the '*' (asterisk) character in the sequence.

STEP 1 - Select your database

PROTEIN DATABASES
- UniProt Knowledgebase
- UniProtKB/Swiss-Prot
- UniProtKB/Swiss-Prot isoforms
- UniProtKB/TrEMBL
- UniProt Clusters
  - UniProt Clusters 100%
  - UniProt Clusters 90%
  - UniProt Clusters 50%

STEP 2 - Enter your input sequence

Enter or paste a PROTEIN sequence in any supported format:

Upload a file:

STEP 3 - Set your parameters

ITEREATION RELATED PARAMETERS:

STEP 4 - Submit your job

Be notified by email (Tick this box if you want to be notified by email when the results are available)

EMAIL:

TITLE: If available, the title will be included in the subject of the notification email and can be used as a way to identify your analysis